Signal Peptide Database - Viruses

 Entry Details
ID   1722
Source Database   UniProtKB/Swiss-Prot
UniProtKB/Swiss-Prot Accession Number   Q5Y388    (Created: 2006-05-30 Updated: 2008-11-25)
UniProtKB/Swiss-Prot Entry Name   POLS_GETV
Protein Name   Structural polyprotein
Gene  
Organism Scientific   Getah virus
Organism Common   GETV
Lineage   Viruses
  ssRNA positive-strand viruses, no DNA stage
    Togaviridae
      Alphavirus
        SFV complex
Protein Length [aa]   1253
Protein Mass [Da]   137888
Features  
TypeDescriptionStatusStartEnd
signal peptide   Not cleaved   potential   269   287
chain   Capsid protein   by similarity   1   268
chain   p62   by similarity   269   754
chain   E3 protein   by similarity   269   332
chain   E2 envelope glycoprotein   by similarity   333   754
chain   6K protein   by similarity   755   815
chain   E1 envelope glycoprotein   by similarity   816   1253
disulfide bond      by similarity   864   929
disulfide bond      by similarity   877   909
disulfide bond      by similarity   878   911
disulfide bond      by similarity   883   893
disulfide bond      by similarity   1074   1086
disulfide bond      by similarity   1116   1191
disulfide bond      by similarity   1121   1195
disulfide bond      by similarity   1143   1185
transmembrane region      potential   695   715
transmembrane region      potential   770   790
transmembrane region      potential   793   813
transmembrane region      potential   1228   1248
topological domain   Extracellular   potential   333   694
topological domain   Cytoplasmic   potential   716   754
topological domain   Extracellular   potential   755   769
topological domain   Cytoplasmic   potential   791   792
topological domain   Extracellular   potential   814   815
topological domain   Extracellular   potential   826   1227
topological domain   Cytoplasmic   potential   1249   1253
domain   Peptidase S3      113   268
region of interest   Intrinsically disordered, in contact with genomic RNA in nucleocapsid   potential   1   114
region of interest   Ribosome-binding   by similarity   93   107
region of interest   Transient transmembrane before p62-6K protein processing   potential   727   747
region of interest   E1 fusion peptide loop   by similarity   899   916
glycosylation site   N-linked (GlcNAc...)   potential   279   279
glycosylation site   N-linked (GlcNAc...)   potential   325   325
glycosylation site   N-linked (GlcNAc...)   potential   532   532
glycosylation site   N-linked (GlcNAc...)   potential   594   594
glycosylation site   N-linked (GlcNAc...)   potential   768   768
glycosylation site   N-linked (GlcNAc...)   potential   956   956
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
sequence variant   (in strain: Isolate MM 2021)      0   0
site   Cleavage; by capsid protein   by similarity   268   269
site   Cleavage; by host furin   by similarity   332   333
site   Cleavage; by host signal peptidase   by similarity   754   755
site   Cleavage; by host signal peptidase   by similarity   815   816
active site   Charge relay system   by similarity   146   146
active site   Charge relay system   by similarity   152   152
active site   Charge relay system   by similarity   220   220
lipid moiety-binding region   S-palmitoyl cysteine; by host   by similarity   727   727
lipid moiety-binding region   S-palmitoyl cysteine; by host   by similarity   747   747
lipid moiety-binding region   S-palmitoyl cysteine; by host   by similarity   748   748
SP Length   19
 ----+----1----+----2----+----3----+----4----+----5
Signal Peptide SAALMMCVLANVTFPCSEP
Sequence MNYIPTQTFYGRRWRPRPAYRPWRVPMQPAPPMVIPELQTPIVQAQQMQQ
LISAVSALTTKQNGKAPKKPKKKPQKAKAKKNEQQKKNENKK
PPPKQKNP
AKKKKPG
KRERMCMKIENDCIFEVKLDGKVTGYACLVGDKVMKPAHVKGV
I
DNPDLAKLTYKKSSKYDLECAQIPVHMKSDASKYTHEKPEGHYNWHHGA
VQYSGGRFTIPTGAGKPGD
SGRPIFDNKGRVVAIVLGGANEGARTALSVV
TWTKDMVTRYTPEGTEE
WSAALMMCVLANVTFPCSEPACAPCCYEKQPEQ
TLRMLEDNVDRPGYYDLLEATMTC
NNSARHRRSVTKHFNVYKATKPYLAY
CADCGDGQFCYSPVAIEKIRDEASDGMIKIQVAAQIGINKGGTHEHNKIR
YIAGHDMKEANRDSLQVHTSGVCAIRGTMGHFIVAYCPPGDELKVQFQDA
ESHTQACKVQYKHAPAPVGREKFTVRPHFGIEVPCTTYQLTTAPTEEEID
MHTPPDIPDITLLSQQSGNVKITAGGKTIRY
NCTCGSGNVGTTSSDKTIN
SCKIAQCHAAVTNHDKWQYTSSFVPRADQLSRKGKVHVPFPLT
NSTCRVP
VARAPGVTYGKRELTVKLHPDHPTLLTYRSLGADPRPYEEWIDRYVERTI
PVTEDGIEYRWGNNPPVRLWAQLTTEGKPHGWPHEIILYYYGLY
PAATIA
AVSAAGLAVVLSLLA
SCYMFATARRKCLTPYALTPGAVVPVTLGVLCCAP
RAH
AASFAESMAYLWDENQTLFWLELATPLAAIIILVCCLKNLLCCCKPL
SFLVLVSLGTPVV
KSYEHTATIPNVVGFPYKAHIERNGFSPMTLQLEVLG
TSLEPTLNLEYITCEYKTVVPSPYIKCCGTSECRSMERPDYQCQVYTG
VY
PFMWGGAYCFCDTENT
QLSEAYVDRSDVCKHDHAAAYKAHTAAMKATIRI
SYGNL
NQTTTAFVNGEHTVTVGGSRFTFGPISTAWTPFDNKIVVYKNDVY
NQDFPPYGSGQPGRFGDIQSRTVESKDLYANTALKLSRPSSGTVHVPYTQ
TPSGFKYWIKERGTSLNDKAPFGCVIKTNPVRAENCAVGNIPVSMDIPDT
AFTRVIDAPAVTNLECQVAVCTHSSDFGGIATLTFKTDKPGKCAVHSHSN
VATIQEAAVDIKTDGKITLHFSTASASPAFKVSVCSAKTTCMAACEPPKD
HIVPYGASHNNQVFPDMSGTAMTWVQR
VAGGLGGLTLAAVAVLILVTCVT
MRR
Original MNYIPTQTFYGRRWRPRPAYRPWRVPMQPAPPMVIPELQTPIVQAQQMQQ
LISAVSALTTKQNGKAPKKPKKKPQKAKAKKNEQQKKNENKKPPPKQKNP
AKKKKPGKRERMCMKIENDCIFEVKLDGKVTGYACLVGDKVMKPAHVKGV
IDNPDLAKLTYKKSSKYDLECAQIPVHMKSDASKYTHEKPEGHYNWHHGA
VQYSGGRFTIPTGAGKPGDSGRPIFDNKGRVVAIVLGGANEGARTALSVV
TWTKDMVTRYTPEGTEEWSAALMMCVLANVTFPCSEPACAPCCYEKQPEQ
TLRMLEDNVDRPGYYDLLEATMTCNNSARHRRSVTKHFNVYKATKPYLAY
CADCGDGQFCYSPVAIEKIRDEASDGMIKIQVAAQIGINKGGTHEHNKIR
YIAGHDMKEANRDSLQVHTSGVCAIRGTMGHFIVAYCPPGDELKVQFQDA
ESHTQACKVQYKHAPAPVGREKFTVRPHFGIEVPCTTYQLTTAPTEEEID
MHTPPDIPDITLLSQQSGNVKITAGGKTIRYNCTCGSGNVGTTSSDKTIN
SCKIAQCHAAVTNHDKWQYTSSFVPRADQLSRKGKVHVPFPLTNSTCRVP
VARAPGVTYGKRELTVKLHPDHPTLLTYRSLGADPRPYEEWIDRYVERTI
PVTEDGIEYRWGNNPPVRLWAQLTTEGKPHGWPHEIILYYYGLYPAATIA
AVSAAGLAVVLSLLASCYMFATARRKCLTPYALTPGAVVPVTLGVLCCAP
RAHAASFAESMAYLWDENQTLFWLELATPLAAIIILVCCLKNLLCCCKPL
SFLVLVSLGTPVVKSYEHTATIPNVVGFPYKAHIERNGFSPMTLQLEVLG
TSLEPTLNLEYITCEYKTVVPSPYIKCCGTSECRSMERPDYQCQVYTGVY
PFMWGGAYCFCDTENTQLSEAYVDRSDVCKHDHAAAYKAHTAAMKATIRI
SYGNLNQTTTAFVNGEHTVTVGGSRFTFGPISTAWTPFDNKIVVYKNDVY
NQDFPPYGSGQPGRFGDIQSRTVESKDLYANTALKLSRPSSGTVHVPYTQ
TPSGFKYWIKERGTSLNDKAPFGCVIKTNPVRAENCAVGNIPVSMDIPDT
AFTRVIDAPAVTNLECQVAVCTHSSDFGGIATLTFKTDKPGKCAVHSHSN
VATIQEAAVDIKTDGKITLHFSTASASPAFKVSVCSAKTTCMAACEPPKD
HIVPYGASHNNQVFPDMSGTAMTWVQRVAGGLGGLTLAAVAVLILVTCVT
MRR
 ----+----1----+----2----+----3----+----4----+----5
Hydropathies  
 

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