Signal Peptide Database - Viruses

 Entry Details
ID   1920
Source Database   UniProtKB/Swiss-Prot
UniProtKB/Swiss-Prot Accession Number   Q89730    (Created: 1997-11-01 Updated: 2008-11-25)
UniProtKB/Swiss-Prot Entry Name   VGLC_HHV2H
Protein Name   Glycoprotein C
Gene   GC
Organism Scientific   Human herpesvirus 2 (strain HG52)
Organism Common   HHV-2
Lineage   Viruses
  dsDNA viruses, no RNA stage
    Herpesvirales
      Herpesviridae
        Alphaherpesvirinae
          Simplexvirus
Protein Length [aa]   480
Protein Mass [Da]   51671
Features  
TypeDescriptionStatusStartEnd
signal peptide      potential   1   27
chain   Glycoprotein C      28   480
disulfide bond      by similarity   255   316
transmembrane region      potential   448   468
domain   Ig-like      236   328
glycosylation site   N-linked (GlcNAc...)   potential   40   40
glycosylation site   N-linked (GlcNAc...)   potential   52   52
glycosylation site   N-linked (GlcNAc...)   potential   117   117
glycosylation site   N-linked (GlcNAc...)   potential   150   150
glycosylation site   N-linked (GlcNAc...)   potential   166   166
glycosylation site   N-linked (GlcNAc...)   potential   331   331
SP Length   27
 ----+----1----+----2----+----3----+----4----+----5
Signal Peptide MALGRVGLAVGLWGLLWVGVVVVLANA
Sequence MALGRVGLAVGLWGLLWVGVVVVLANASPGRTITVGPRGNASNAAPSASP
R
NASAPRTTPTPPQPRKATKSKASTAKPAPPPKTGPPKTSSEPVRCNRHD
PLARYGSRVQIRCRFP
NSTRTEFRLQIWRYATATDAEIGTAPSLEEVMVN
VSAPPGGQLVYDSAPNRTDPHVIWAEGAGPGASPRLYSVVGPLGRQRLII
EELTLETQGMYYWVWGRTDRPSAYGTWVRVRVFRP
PSLTIHPHAVLEGQP
FKATCTAATYYPGNRAEFVWFEDGRRVFDPAQIHTQTQENPDGFSTVSTV
TSAAVGGQGPPRTFTCQLTWHRDSVSFS
RRNASGTASVLPRPTITMEFTG
DHAVCTAGCVPEGVTFAWFLGDDSSPAEKVAVASQTSCGRPGTATIRSTL
PVSYEQTEYICRLAGYPDGIPVLEHHGSHQPPPRDPTERQVIRAVEG
AGI
GVAVLVAVVLAGTAVVYL
THASSVRYRRLR
Original MALGRVGLAVGLWGLLWVGVVVVLANASPGRTITVGPRGNASNAAPSASP
RNASAPRTTPTPPQPRKATKSKASTAKPAPPPKTGPPKTSSEPVRCNRHD
PLARYGSRVQIRCRFPNSTRTEFRLQIWRYATATDAEIGTAPSLEEVMVN
VSAPPGGQLVYDSAPNRTDPHVIWAEGAGPGASPRLYSVVGPLGRQRLII
EELTLETQGMYYWVWGRTDRPSAYGTWVRVRVFRPPSLTIHPHAVLEGQP
FKATCTAATYYPGNRAEFVWFEDGRRVFDPAQIHTQTQENPDGFSTVSTV
TSAAVGGQGPPRTFTCQLTWHRDSVSFSRRNASGTASVLPRPTITMEFTG
DHAVCTAGCVPEGVTFAWFLGDDSSPAEKVAVASQTSCGRPGTATIRSTL
PVSYEQTEYICRLAGYPDGIPVLEHHGSHQPPPRDPTERQVIRAVEGAGI
GVAVLVAVVLAGTAVVYLTHASSVRYRRLR
 ----+----1----+----2----+----3----+----4----+----5
Hydropathies  
 

© 2007-2017 Dr. Katja Kapp, Kassel & thpr.net e. K., Dresden, Germany, last update 2010-06-11