Signal Peptide Website: Links

Source databases:
UniProt Knowledgebase:http://expasy.org/sprot/
NCBI:http://www.ncbi.nlm.nih.gov/
NCBI, PubMed:http://www.ncbi.nlm.nih.gov/sites/entrez/


Signal sequence prediction:
SignalP 4.1 Server:http://www.cbs.dtu.dk/services/SignalP/
SignalP V2.0.b2:http://www.cbs.dtu.dk/services/SignalP-2.0/
Phobius:http://phobius.sbc.su.se/
PrediSi:http://www.predisi.de/
SIGCLEAVE:http://www.bioinformatics.nl/cgi-bin/emboss/help/sigcleave
ANTHEPROT - Signal prediction:http://antheprot-pbil.ibcp.fr/signal_prediction.html
SOSUIsignal:http://bp.nuap.nagoya-u.ac.jp/sosui/sosuisignal/sosuisignal_submit.html
Signal Find Server:http://signalfind.org/
SPD - Secreted Protein Database:http://spd.cbi.pku.edu.cn/
SPEPlip:http://gpcr.biocomp.unibo.it/cgi/predictors/spep/pred_spepcgi.cgi


Alignments:
ClustalW:http://npsa-pbil.ibcp.fr/cgi-bin/npsa_automat.pl?page=npsa_clustalw.html
Clustal Omegahttp://www.ebi.ac.uk/Tools/clustalw/index.html
AliBee - Multiple Alignment:http://www.genebee.msu.su/services/malign_reduced.html
Align:http://vega.igh.cnrs.fr/bin/align-guess.cgi
KALIGN:http://msa.cgb.ki.se/cgi-bin/msa.cgi
CHAOS + DIALIGN:http://dialign.gobics.de/chaos-dialign-submission
MULTALIN:http://npsa-pbil.ibcp.fr/cgi-bin/npsa_automat.pl?page=npsa_multalin.html


Further information on signal sequences:
SPdb: a signal peptide database:http://proline.bic.nus.edu.sg/spdb/index.html


Further information on related topics:
a) Signal Recognition Particle
Signal Recognition Particle Database:http://genome.ku.dk/resources/srpdb/


b) Protein Targeting/Protein Translocation
General Principles of Membrane Proteinhttp://blanco.biomol.uci.edu/
ProteinTargeting and Translocation:http://www.rockefeller.edu/pubinfo/proteintarget.html
TCDB Transport Classification Database:http://www.tcdb.org/


c) FlyBase
FlyBase Database:http://flybase.bio.indiana.edu/



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