Signal Peptide Database

Signal Peptide Database - Viruses

Entry Details

3415

Source Database

UniProtKB/Swiss-Prot

UniProtKB/Swiss-Prot Accession Number

Q6DQ18 (Created: 2007-11-13 Updated: 2008-11-25)

UniProtKB/Swiss-Prot Entry Name

HEMA_I02A6

Protein Name

Hemagglutinin

Gene

Organism Scientific

Influenza A virus (strain A/Chicken/Hong Kong/YU22/2002 H5N1 genotype Z)

Organism Common

Lineage

Viruses
  ssRNA negative-strand viruses
    Orthomyxoviridae
      Influenzavirus A

Protein Length [aa]

559

Protein Mass [Da]

63212

Features

TypeDescriptionStatusStartEnd
signal peptide         1   8
chain   Hemagglutinin HA1 chain      9   330
chain   Hemagglutinin HA2 chain      339   559
disulfide bond   Interchain (between HA1 and HA2 chains)   by similarity   12   475
disulfide bond      by similarity   50   282
disulfide bond      by similarity   63   75
disulfide bond      by similarity   98   143
disulfide bond      by similarity   286   310
disulfide bond      by similarity   482   486
transmembrane region      potential   524   544
topological domain   Extracellular   potential   9   523
topological domain   Cytoplasmic   potential   545   559
glycosylation site   N-linked (GlcNAc...)   potential   18   18
glycosylation site   N-linked (GlcNAc...)   potential   19   19
glycosylation site   N-linked (GlcNAc...)   potential   31   31
glycosylation site   N-linked (GlcNAc...)   potential   162   162
glycosylation site   N-linked (GlcNAc...)   potential   294   294
glycosylation site   N-linked (GlcNAc...)   potential   492   492
site   Cleavage; by host   by similarity   338   339
propeptide   Connecting peptide      331   338
lipid moiety-binding region   S-palmitoyl cysteine; by host   by similarity   549   549
lipid moiety-binding region   S-palmitoyl cysteine; by host   by similarity   556   556
lipid moiety-binding region   S-palmitoyl cysteine; by host   by similarity   559   559
non-terminal residue         1   1
non-terminal residue         559   559

SP Length

----+----1----+----2----+----3----+----4----+----5

Signal Peptide

AIVSLVKS

Sequence

AIVSLVKSDQICIGYHANNSTEQVDTIMEKNVTVTHAQDILEKTHNGKLC
DLDGVKPLILRDCSVAGWLLGNPMCDEFINVPEWSYIVEKASPANDLCYP
GDFNDYEELKHLLSGINHFDKIHIIPKSSWSNHEASSWVSSACPYQGKSS
FFRNVVWLIKKNSSYPTIKRSYDNTNQEDLLVLWGIHHPNDAAEQTRFYQ
NPTTYIGVGTSTLNQRLVPKIATTSKVDGQSGRMEFFWTILKPNDAINFE
SNGNFIAPEYAYKIVKKGDSAIMKSELEYGNCNTKCQTPMGAINSSMPFH
NIHPLTIGECPKYVKSNRLVLATGLRNSPQRERRRKKRGLFGAIAGFIEG
GWQGMVDGWYGYHHSNEQGSGYAADKESTQKAIDGVTNKVNSIIDKMNTQ
FEAVGREFNNLERRIENLNKKMEDGFLDVWTYNAELLVLMENERTLDFHD
SNVKNLYDKVRLQLRDNAKELGNGCFEFYHKCDNECMESVRNGTYDYPQY
SEEARLKREEISGVKLESIGTYQILSIYSTVASSLALAIMVAGLSLWMCS
NGSLQCRIC

Original

----+----1----+----2----+----3----+----4----+----5

Hydropathies

Signal Peptide Website